Open Bioinfo9 opened 2 months ago
Hi .. I am trying to create plot for chip data using non standard ref. All commands work fine except for :
track_plot(summary_list = t)
It shows: Error in round(plot_height, digits = 2) : non-numeric argument to mathematical function
This is my set of commands: library("trackplot")
Sys.setenv(PATH = paste("/data/ngs/programs/bwtool/bwtool-1.0-gamma/bwtool", Sys.getenv("PATH"), sep = ":"))
bigWigs = c("n.bw")
bigWigs = read_coldata(bws = bigWigs, build = GCA_000146045.2_R64_genomic_mod.fna")
oct4_loci = "chrBK006945.2:1-1078177"
t = track_extract(colData = bigWigs, loci = oct4_loci, query_ucsc = FALSE, gtf="genomic_mod.gtf")
track_plot(summary_list = t) Thank you.
Hi .. I am trying to create plot for chip data using non standard ref. All commands work fine except for :
track_plot(summary_list = t)
It shows: Error in round(plot_height, digits = 2) : non-numeric argument to mathematical function
This is my set of commands: library("trackplot")
Sys.setenv(PATH = paste("/data/ngs/programs/bwtool/bwtool-1.0-gamma/bwtool", Sys.getenv("PATH"), sep = ":"))
bigWigs = c("n.bw")
bigWigs = read_coldata(bws = bigWigs, build = GCA_000146045.2_R64_genomic_mod.fna")
oct4_loci = "chrBK006945.2:1-1078177"
t = track_extract(colData = bigWigs, loci = oct4_loci, query_ucsc = FALSE, gtf="genomic_mod.gtf")
track_plot(summary_list = t) Thank you.