Use radiometry image to mask rays

PolarizedLightFieldMicroscopy / GeoBirT

Geometrical Birefringence Tomography

BSD 3-Clause "New" or "Revised" License

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Use radiometry image to mask rays #99

Open gschlafly opened 2 months ago

gschlafly commented 2 months ago

If a black pixel is inside the aperture region, then it is assumed to have accumulated zero retardance from the voxels it transversed. However, sometimes the pixel is black simply because no light could even reach that pixel in the experimental configuration.

gschlafly commented 1 month ago

Mostly addressed with commit https://github.com/PolarizedLightFieldMicroscopy/GeoBirT/commit/0eb713f664f8a4fb27aa4c7c531c0f0cfd936637, except there is an issue with supersample != 1 for experimental images when a radiometry path is not provided.

gschlafly commented 1 month ago