Closed BioGeek closed 2 weeks ago
When building the pi-HelixNovo image (contributed by @tingpeng17 in #7) with ./build_apptainer_images.sh, I get the following error:
./build_apptainer_images.sh
$ ./build_apptainer_images.sh A .sif image for casanovo already exists. Force rebuild? (y/N) n Skipping rebuild for casanovo image. A .sif image for deepnovo already exists. Force rebuild? (y/N) n Skipping rebuild for deepnovo image. Building pi-HelixNovo image... INFO: Starting build... Copying blob bb07dd5150fd skipped: already exists Copying blob 94343313ec15 skipped: already exists Copying blob 30cb60717d1b skipped: already exists Copying blob d7615cdeb31c skipped: already exists Copying blob 02038efee18d skipped: already exists Copying blob 55e579d00f85 skipped: already exists Copying blob 4a0e0397f0b9 skipped: already exists Copying blob 3b5b2aea802b skipped: already exists Copying blob f522bcf834eb skipped: already exists Copying blob 40619f4600e0 skipped: already exists Copying blob d1d0953d9b71 skipped: already exists Copying config bd304aca10 done | Writing manifest to image destination 2024/09/21 02:05:17 info unpack layer: sha256:94343313ec1512ab02267e4bc3ce09eecb01fda5bf26c56e2f028ecc72e80b18 2024/09/21 02:05:18 info unpack layer: sha256:30cb60717d1ba85e818041069d6fc3c6141d55b3df1ef474a98d7483b45d8bc8 2024/09/21 02:05:18 info unpack layer: sha256:55e579d00f850b590b69c448ac375b7d9f4ed6c8e9bd256797d7cd1e6e384563 2024/09/21 02:05:18 info unpack layer: sha256:d7615cdeb31c9b086af59df6272268628bc8c953936db377198c8e8909f71afd 2024/09/21 02:05:19 info unpack layer: sha256:02038efee18d0327e491ce7705c3ca83c207be2c9d053ca7fc0be5c73690c0b9 2024/09/21 02:05:19 info unpack layer: sha256:bb07dd5150fdd44290751bf20784ebc76804f3c5f1e705c8695042b45558d9e4 2024/09/21 02:05:19 info unpack layer: sha256:4a0e0397f0b97635bf985b30456665cbbb23e76f9d703df223b85c8cdf8045ea 2024/09/21 02:05:32 info unpack layer: sha256:3b5b2aea802b018088c64ba44ac1c5177240aa770687c5808ddb147fd31b2385 2024/09/21 02:05:32 info unpack layer: sha256:d1d0953d9b71623f0f2f4460d433b430569b0c9158f4cba44a6499170b7f3052 2024/09/21 02:05:32 info unpack layer: sha256:40619f4600e02e48df96ab8302b9c0b817e8b0c1f91f12a19fa83454eb5b3f39 2024/09/21 02:05:50 info unpack layer: sha256:f522bcf834eb96571969caab120cbe38db4fd87cf3cb1b4a30f5d053dcede46a INFO: Copying algorithms/pi-HelixNovo to /algo INFO: Copying algorithms/base to /algo/base INFO: Running post scriptlet + cd /algo + git clone https://github.com/PHOENIXcenter/pi-HelixNovo.git -b pi-HelixNovo-for-DenovoBenchmarks Cloning into 'pi-HelixNovo'... remote: Enumerating objects: 536, done. remote: Total 536 (delta 0), reused 0 (delta 0), pack-reused 536 (from 1) Receiving objects: 100% (536/536), 6.31 MiB | 8.86 MiB/s, done. Resolving deltas: 100% (251/251), done. + chmod +x algorithms/pi-HelixNovo/make_predictions.sh chmod: cannot access 'algorithms/pi-HelixNovo/make_predictions.sh': No such file or directory FATAL: While performing build: while running engine: while running %post section: exit status 1
When building the pi-HelixNovo image (contributed by @tingpeng17 in #7) with
./build_apptainer_images.sh, I get the following error: