PoolLab / ReferenceEnhancer

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OverlapResolutions(genome_annotation = genome_annotation, overlap_data = gene_overlaps, gene_pattern = c("Rik$", "^Gm")) #4

Open trianaptx opened 1 year ago

trianaptx commented 1 year ago

OverlapResolutions(genome_annotation = genome_annotation,

hello, after read your paper,I try to improve my reference gtf, but I encounter some problem when I run this code, could you please tell me how to address it, thanks! The gtf I use is "./refdata-gex-GRCh38-2020-A/genes/genes.gtf".

trianaptx commented 1 year ago

Is the problem of gene_pattern parameter?