Closed MathiasRenaud closed 6 years ago
Some stats other than Kaphi::kernel attempted to fit Yule model
And for birth-death model
PDF results are stored on Nagisa in the Documents folder.
MAST metric freezes in parameter space early on for both models.
Trip and TripL don't work for Birth-death model. The error message for Trip occurs when trying to retrieve the MRCA of a triplet for each tree. The error message for TripL occurs because the two trees are apparently not of the same size, or do not retain the same labels. I will be investigating this further, but it's not a high priority at the moment.
I will close this issue when I forward the PDFs to @ArtPoon
First, determine which stats to use.