Implement wrapper for MASTER simulations of SI models

PoonLab / Kaphi

Kernel-embedded ABC-SMC for phylodynamic inference

GNU Affero General Public License v3.0

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Implement wrapper for MASTER simulations of SI models #108

Closed ArtPoon closed 6 years ago

ArtPoon commented 6 years ago

Refer to Bethany Dearlove's paper on coalescent and SI models.

ArtPoon commented 6 years ago

Also see issues #105 and #107

ArtPoon commented 6 years ago

Currently .call_master is making and deleting temporary files in the present working directory. Instead let's use the system temp directory that can be accessed via R function tempdir().