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PoonLab / KaphiShiny

A Shiny web interface for running Kaphi
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Shiny: Parallel or Single Threaded #13

Closed 0ldM4j0r closed 6 years ago

0ldM4j0r commented 6 years ago

During today's dev meeting we discussed that while the tsv file is being generated, plots should be created. These two operations running in parallel, but I am not sure whether or not the first operation (generating the tsv) should be run in parallel within itself. As of now, generating the tsv in the shiny app isn't being run in parallel since the machines I am testing on (Nagisa, Mac Mini, My laptop) don't have the same number of threads.

ArtPoon commented 6 years ago

Shiny is single-threaded by design - add an argument to the run SMC function that will generate plots from TSV outputs.