projects.json file supplied via command-line is not used for analysis

PoonLab / MiCall-Lite

Pipeline for processing FASTQ data from an Illumina MiSeq for human RNA virus (HIV, hepatitis C virus) genotyping

GNU Affero General Public License v3.0

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Closed dfornika closed 4 years ago

dfornika commented 4 years ago

In v0.1rc4, If a projects.json file is supplied on the command-line using the --projects flag, it isn't actually incorporated into the analysis.