Handle variable length windows

PoonLab / OpenRDP

An open-source re-implementation of the RDP4 recombination detection program

GNU General Public License v3.0

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Handle variable length windows #22

Closed kwade4 closed 2 years ago

kwade4 commented 3 years ago

Currently, OpenRDP only handles fixed-length windows. RDP allows users to specify the proportion of variable sites that should be included in the window.

Since each method records the indices of variable sites (poly_sites attribute), this should be straightforward to implement.

ArtPoon commented 2 years ago

Implemented, @kwade4 still testing