Dev - Migrate to database

PoonLab / covizu

Rapid analysis and visualization of coronavirus genome variation

https://filogeneti.ca/CoVizu/

MIT License

45 stars 20 forks source link

Dev - Migrate to database #487

Closed nav-mohan closed 11 months ago

nav-mohan commented 1 year ago

Includes script for deleting/creating MongoDB user accounts.
Includes script for updating the database
Includes documentation on how to install and configure MongoDB.
Scripts were written under the assumption that we would be running two instances of a database per server.

GopiGugan commented 1 year ago

@nav-mohan to fix paths for the front-end unit tests

@GopiGugan to test PR

nav-mohan commented 1 year ago

I think the frontend tests might be failing because the YML file for our Github Actions needs to be updated. The error seems to suggest that the Github Action cannot find the cypress.config.js file because I moved it into the ./config/ folder. So we just need to specify the path to cypress.config.js explicity

ArtPoon commented 1 year ago

Please provide instructions for building a local database prior to merging this into dev, so that each of us can revise our build/test environments!

GopiGugan commented 1 year ago

Building the database with production data takes over 30 minutes. Looking to see if there are ways to optimize this