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PoonLab
/
covizu
Rapid analysis and visualization of coronavirus genome variation
https://filogeneti.ca/CoVizu/
MIT License
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20
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fixes #497 and #524
#525
Closed
ArtPoon
closed
3 months ago
ArtPoon
commented
3 months ago
use
Math.log10
transform on predicted numbers of infections by lineage to improve distribution for colour palette
added predicted number of infections (
tip.infections
) to lineage CSV output
tweaked infections legend label in all four languages
GopiGugan
commented
3 months ago
Checking the following:
[x] Search
[x] Search by accession number
[x] Search by lineage
[x] Search by country
[x] Search by country (with date filter)
[x] Tree filtering
[x] Download Time-scaled tree (nwk)
[x] Download Time-scaled tree (csv)
[x] Download Beadplot (svg)
[x] Download Beadplot (nwk)
[x] Download mutation list (csv)
[x] Beadplot cutoff slider
[x] Expanding Beadplot
[x] Translated pages
[x] Changing the colour of the tree based on divergence, collection date, etc.
[x] Left/Right arrow key to move between beads
[x] Tooltips
[x] Countries/Samples/Mutations tabs are populating the correct information
[x] Build front-end database without issues
[ ] Port front-end change to
epicov
branch
Math.log10
transform on predicted numbers of infections by lineage to improve distribution for colour palettetip.infections
) to lineage CSV output