Automatically detect DataFormat of peak annotation files - Githubissues

Princeton-LSI-ResearchComputing / tracebase

Mouse Metabolite Tracing Data Repository for the Rabinowitz Lab

MIT License

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Automatically detect DataFormat of peak annotation files #956

Open lparsons opened 2 months ago

lparsons commented 2 months ago

FEATURE REQUEST

Inspiration

Adding additional peak annotation formats makes using format flags cumbersome. Automatically detecting recognized formats would simplify loading.

Description

[x] #958
[x] #959

Alternatives

None

Dependencies

None

Comment

None

ISSUE OWNER SECTION

Assumptions

List of assumptions that the code will not explicitly address/check
E.g. We will assume input is correct (explaining why there is no validation)

Limitations

A list of things this work will specifically not do
E.g. This feature will only handle the most frequent use case X

Affected Components

change: File path or DB table ...
add: Environment variable or server setting
delete: External executable or cron job

Requirements

[ ] 1. List of numbered conditions to be met for the feature
[ ] 2. E.g. Every column/row must display a value, i.e. cannot be empty
[ ] 3. Numbers for reference & checkboxes for progress tracking

DESIGN

Interface Change description

None provided

Code Change Description

None provided

Tests

[ ] 1. A description of at least one test for each requirement above.
[ ] 2. E.g. Test for req 2 that there's an exception when display value is ''
[ ] 3. Numbers for reference & checkboxes for progress tracking

hepcat72 commented 2 months ago

I haven't put it in the design yet, but this is my plan for #825.