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PrincetonUniversity / DP_GP_cluster

BSD 3-Clause "New" or "Revised" License
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Job killed #12

Open ragak opened 6 years ago

ragak commented 6 years ago

Hi I've been trying to run your program on my data set using a few different conditions, and every time it dies with the error "Killed: 9" after the Gibbs sampling. I am able to successfully run the test data, and my data is very similar, except larger. Does "Killed: 9" refer to a specific error? I couldn't find it in the DP_GP_cluster.py code, so I assume it's from some module that your code imports, but I wanted to check if you knew what it meant? Thank you.

abayega commented 5 years ago

This is most likely a memory issue. I kept running into this issue until I ran the analysis on our cluster which then ran without error. If you run on a cluster like ours you might run into device error for which you have to uncomment the first ~4-5 lines in the DP_GP_cluster.py script

ragak commented 5 years ago

Thank you! Yes it was a memory error