Hi,
I ran the script on our cluster using with and without the --fast option as follows:
python DPGP_cluster.py -i expression.txt -o $date --plot --plot_types pdf
The program gets killed when run directly in the console or when submitted to job scheduler and I get the following message:
job_scripts/119534: line 21: 26827 Killed
I think when running it in console it successfully finishes the Gibbs sampling stage.
Any advise on how I can fix this? Also, let me know if you need more information.
Hi, I ran the script on our cluster using with and without the
--fastoption as follows:python DPGP_cluster.py -i expression.txt -o $date --plot --plot_types pdfThe program gets killed when run directly in the console or when submitted to job scheduler and I get the following message:
job_scripts/119534: line 21: 26827 KilledI think when running it in console it successfully finishes the Gibbs sampling stage.
Any advise on how I can fix this? Also, let me know if you need more information.
Would love to run this program on my data!