PrincetonUniversity / DP_GP_cluster

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Installation problem #21

Open Ph0Ph0Q opened 4 years ago

Ph0Ph0Q commented 4 years ago

hello, I try to install your tool and i have this message in my terminal: running install running build running build_py running build_ext skipping 'DP_GP/core.c' Cython extension (up-to-date) building 'DP_GP.core' extension gcc -pthread -B /home/fournel/miniconda3/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/home/fournel/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/home/fournel/miniconda3/include/python3.7m -c DP_GP/core.c -o build/temp.linux-x86_64-3.7/DP_GP/core.o In file included from /home/fournel/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822:0, from /home/fournel/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /home/fournel/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from DP_GP/core.c:407: /home/fournel/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]

warning "Using deprecated NumPy API, disable it with " \

^~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_squared_dist_two_matrices’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3199:7: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3248:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_2read_gene_expression_matrices’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3641:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_10)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3694:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3764:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:3935:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_1)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4027:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_10)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4133:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4245:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_10)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4327:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4458:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:4549:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_10)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_8save_log_likelihoods’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:5180:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_1)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_10save_posterior_similarity_matrix_key’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:5498:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_1)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_10dp_cluster_init__’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6013:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_13)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6134:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6351:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6449:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_10)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6495:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6570:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6740:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_14)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6861:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:6954:7: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7126:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7190:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c: In function ‘__pyx_pf_5DP_GP_4core_10dp_cluster_2update_rank_U_and_log_pdet’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7502:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_1)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7687:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7729:7: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7797:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:7842:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_2)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_10dp_cluster_8update_cluster_attributes’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:8529:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:8621:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:8667:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:8806:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_13)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:8927:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_9)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9072:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_15)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9193:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_13)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9283:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_2)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9329:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_15)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9490:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_2)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9566:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9655:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9744:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:9864:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:10053:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_2)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:10223:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:10352:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:10427:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_13)) { ^~~~~~~ DP_GP/core.c: In function ‘__pyx_pf_5DP_GP_4core_13gibbssamplerinit’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11398:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11489:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11575:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_1)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11714:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11780:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_2)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_13gibbs_sampler_2get_log_posterior’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:11957:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:12044:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:12172:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:12236:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_13gibbs_sampler_4calculate_prior’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:12395:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:12856:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_13gibbs_sampler_6calculate_likelihood_MVN_by_dict’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13036:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13246:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_2)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13312:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13425:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_20)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13476:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_18)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13522:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13629:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_17)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13682:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:13741:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_2)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_13gibbs_sampler_10update_S_matrix’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:14061:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_1)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:14300:7: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_2)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_pf_5DP_GP_4core_13gibbs_sampler_16sampler’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:14804:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_9)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:14850:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_7)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:15264:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:15324:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:15661:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:15897:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:15943:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16055:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16124:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16515:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_9)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16561:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_5)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16692:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:16737:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_10)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:17021:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_11)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:17075:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_9)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:17260:15: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:17436:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_22)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:17490:13: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:18247:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_24)) { ^~~~~~~ DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:18297:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(__pyx_t_10)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_memoryview_convert_item_to_object’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:24613:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_5)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_memoryview_assign_item_from_object’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:24915:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_6)) { ^~~~~~~ DP_GP/core.c: In function ‘pyx_memoryview_err_dim’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:31301:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_3)) { ^~~~~~~ DP_GP/core.c: In function ‘__pyx_memoryview_err’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:31419:11: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c: In function ‘PyInit_core’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:34916:9: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(pyx_t_4)) { ^~~~~~~ DP_GP/core.c: In function ‘__Pyx_PyCFunction_FastCall’: DP_GP/core.c:35592:13: error: too many arguments to function ‘(PyObject ()(PyObject , PyObject const, Py_ssize_t))meth’ return (((Pyx_PyCFunctionFast)meth)) (self, args, nargs, NULL); ~^~~~~~~ DP_GP/core.c:35583:9: warning: unused variable ‘flags’ [-Wunused-variable] int flags; ^~~~~ DP_GP/core.c:35582:15: warning: unused variable ‘result’ [-Wunused-variable] PyObject result; ^~ DP_GP/core.c: In function ‘PyxExceptionSave’: DP_GP/core.c:35913:21: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? type = tstate->exc_type; ^~~~ curexc_type DP_GP/core.c:35914:22: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? value = tstate->exc_value; ^~~~~ curexc_value DP_GP/core.c:35915:19: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tb = tstate->exc_traceback; ^~~~~ curexc_traceback DP_GP/core.c: In function ‘PyxExceptionReset’: DP_GP/core.c:35922:24: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tmp_type = tstate->exc_type; ^~~~ curexc_type DP_GP/core.c:35923:25: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tmp_value = tstate->exc_value; ^~~~~ curexc_value DP_GP/core.c:35924:22: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tmp_tb = tstate->exc_traceback; ^~~~~ curexc_traceback DP_GP/core.c:35925:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tstate->exc_type = type; ^~~~ curexc_type DP_GP/core.c:35926:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tstate->exc_value = value; ^~~~~ curexc_value DP_GP/core.c:35927:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tstate->exc_traceback = tb; ^~~~~ curexc_traceback DP_GP/core.c: In function ‘PyxGetException’: DP_GP/core.c:35972:24: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tmp_type = tstate->exc_type; ^~~~ curexc_type DP_GP/core.c:35973:25: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tmp_value = tstate->exc_value; ^~~~~ curexc_value DP_GP/core.c:35974:22: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tmp_tb = tstate->exc_traceback; ^~~~~ curexc_traceback DP_GP/core.c:35975:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tstate->exc_type = local_type; ^~~~ curexc_type DP_GP/core.c:35976:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tstate->exc_value = local_value; ^~~~~ curexc_value DP_GP/core.c:35977:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tstate->exc_traceback = local_tb; ^~~~~ curexc_traceback DP_GP/core.c: In function ‘Pyx_PyObject_CallMethod1’: DP_GP/core.c:193:48: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] ((PyCFunction_Check(func) && METH_FASTCALL == PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))) DP_GP/core.c:36299:17: note: in expansion of macro ‘Pyx_PyFastCFunction_Check’ if (Pyx_PyFastCFunction_Check(function)) { ^~~~~~~ DP_GP/core.c: In function ‘Pyx_PyDict_Values’: DP_GP/core.c:1668:83: error: too many arguments to function ‘(PyObject ()(PyObject , PyObject const, Py_ssize_t))__pyx_umethod_PyDict_Type_values.func’ (PY_VERSION_HEX >= 0x030600B1 && (cfunc)->flag == METH_FASTCALL ? ((Pyx_PyCFunctionFast)(cfunc)->func)(self, &PyTuple_GET_ITEM(__pyx_empty_tuple, 0), 0, NULL) :\ ~^~~~~~~~~~ DP_GP/core.c:37483:16: note: in expansion of macro ‘Pyx_CallUnboundCMethod0’ return Pyx_CallUnboundCMethod0(&__pyx_umethod_PyDict_Type_values, d); ^~~~~~~~~ DP_GP/core.c: In function ‘Pyx_PyDict_Keys’: DP_GP/core.c:1668:83: error: too many arguments to function ‘(PyObject ()(PyObject , PyObject const, Py_ssize_t))__pyx_umethod_PyDict_Type_keys.func’ (PY_VERSION_HEX >= 0x030600B1 && (cfunc)->flag == METH_FASTCALL ? ((Pyx_PyCFunctionFast)(cfunc)->func)(self, &PyTuple_GET_ITEM(__pyx_empty_tuple, 0), 0, NULL) :\ ~^~~~~~~~~~ DP_GP/core.c:37491:16: note: in expansion of macro ‘Pyx_CallUnboundCMethod0’ return Pyx_CallUnboundCMethod0(&__pyx_umethod_PyDict_Type_keys, d); ^~~~~~~~~ DP_GP/core.c: In function ‘Pyx__ExceptionSwap’: DP_GP/core.c:37959:24: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tmp_type = tstate->exc_type; ^~~~ curexc_type DP_GP/core.c:37960:25: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tmp_value = tstate->exc_value; ^~~~~ curexc_value DP_GP/core.c:37961:22: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tmp_tb = tstate->exc_traceback; ^~~~~ curexc_traceback DP_GP/core.c:37962:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_type’; did you mean ‘curexc_type’? tstate->exc_type = type; ^~~~ curexc_type DP_GP/core.c:37963:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’? tstate->exc_value = value; ^~~~~ curexc_value DP_GP/core.c:37964:13: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? tstate->exc_traceback = *tb; ^~~~~ curexc_traceback error: command 'gcc' failed with exit status 1

And when I try the test, python says "missing parenthesis" in the print messages

Any idea what might be going on ?

SpacemanSpiff7 commented 4 years ago

For the gcc issue, you may want to check where you have gcc installed and add it to your path in bashrc. I am having a similar issue with the python message, but I think it's due to me using python 3 instead of python 2

dadrasarmin commented 1 year ago

Hi,

I just tried to install and use this tool. I wrote a detailed and tested solution using conda on how to install and use it on MacOS and Linux here:

https://github.com/PrincetonUniversity/DP_GP_cluster/issues/1#issuecomment-1378696607