Expected behavior
Monai should import itself without triggering warnings
Environment
================================
Printing MONAI config...
================================
MONAI version: 1.3.1
Numpy version: 1.26.4
Pytorch version: 2.3.0
MONAI flags: HAS_EXT = False, USE_COMPILED = False, USE_META_DICT = False
MONAI rev id: 96bfda00c6bd290297f5e3514ea227c6be4d08b4
MONAI __file__: /export/livia/home/vision/<username>/anaconda3/envs/fseft/lib/python3.11/site-packages/monai/__init__.py
Optional dependencies:
Pytorch Ignite version: 0.5.0.post2
ITK version: NOT INSTALLED or UNKNOWN VERSION.
Nibabel version: 5.2.1
scikit-image version: NOT INSTALLED or UNKNOWN VERSION.
scipy version: 1.13.0
Pillow version: 10.3.0
Tensorboard version: NOT INSTALLED or UNKNOWN VERSION.
gdown version: NOT INSTALLED or UNKNOWN VERSION.
TorchVision version: NOT INSTALLED or UNKNOWN VERSION.
tqdm version: 4.66.4
lmdb version: NOT INSTALLED or UNKNOWN VERSION.
psutil version: 5.9.8
pandas version: NOT INSTALLED or UNKNOWN VERSION.
einops version: 0.8.0
transformers version: NOT INSTALLED or UNKNOWN VERSION.
mlflow version: NOT INSTALLED or UNKNOWN VERSION.
pynrrd version: NOT INSTALLED or UNKNOWN VERSION.
clearml version: NOT INSTALLED or UNKNOWN VERSION.
For details about installing the optional dependencies, please visit:
https://docs.monai.io/en/latest/installation.html#installing-the-recommended-dependencies
================================
Printing system config...
================================
System: Linux
Linux version: Ubuntu 22.04.4 LTS
Platform: Linux-5.15.0-112-generic-x86_64-with-glibc2.35
Processor: x86_64
Machine: x86_64
Python version: 3.11.9
Process name: pt_main_thread
Command: ['python', '-c', 'import monai; monai.config.print_debug_info()']
Open files: []
Num physical CPUs: 10
Num logical CPUs: 20
Num usable CPUs: 20
CPU usage (%): [74.2, 3.4, 3.7, 8.7, 3.4, 3.8, 3.4, 4.9, 3.4, 4.2, 3.7, 3.4, 3.4, 3.0, 3.4, 2.6, 2.6, 3.0, 3.0, 3.0]
CPU freq. (MHz): 3461
Load avg. in last 1, 5, 15 mins (%): [4.6, 4.6, 7.2]
Disk usage (%): 99.8
Avg. sensor temp. (Celsius): UNKNOWN for given OS
Total physical memory (GB): 125.5
Available memory (GB): 119.7
Used memory (GB): 4.7
================================
Printing GPU config...
================================
Num GPUs: 2
Has CUDA: True
CUDA version: 11.8
cuDNN enabled: True
NVIDIA_TF32_OVERRIDE: None
TORCH_ALLOW_TF32_CUBLAS_OVERRIDE: None
cuDNN version: 8700
Current device: 0
Library compiled for CUDA architectures: ['sm_50', 'sm_60', 'sm_61', 'sm_70', 'sm_75', 'sm_80', 'sm_86', 'sm_37', 'sm_90', 'compute_37']
GPU 0 Name: NVIDIA GeForce RTX 3090
GPU 0 Is integrated: False
GPU 0 Is multi GPU board: False
GPU 0 Multi processor count: 82
GPU 0 Total memory (GB): 23.7
GPU 0 CUDA capability (maj.min): 8.6
GPU 1 Name: NVIDIA GeForce RTX 3090
GPU 1 Is integrated: False
GPU 1 Is multi GPU board: False
GPU 1 Multi processor count: 82
GPU 1 Total memory (GB): 23.7
GPU 1 CUDA capability (maj.min): 8.6
Additional context
The import result in the following warning:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File ".../lib/python3.11/site-packages/monai/__init__.py", line 58, in <module>
load_submodules(sys.modules[__name__], False, exclude_pattern=excludes)
File ".../lib/python3.11/site-packages/monai/utils/module.py", line 212, in load_submodules
importer.find_spec(name).loader.load_module(name) # type: ignore
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen importlib._bootstrap_external>", line 605, in _check_name_wrapper
File "<frozen importlib._bootstrap_external>", line 1120, in load_module
File "<frozen importlib._bootstrap_external>", line 945, in load_module
File "<frozen importlib._bootstrap>", line 283, in _load_module_shim
DeprecationWarning: the load_module() method is deprecated and slated for removal in Python 3.12; use exec_module() instead
Traceback (most recent call last):
File ".../lib/python3.11/weakref.py", line 666, in _exitfunc
f()
File ".../lib/python3.11/weakref.py", line 590, in __call__
return info.func(*info.args, **(info.kwargs or {}))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File ".../lib/python3.11/tempfile.py", line 934, in _cleanup
_warnings.warn(warn_message, ResourceWarning)
ResourceWarning: Implicitly cleaning up <TemporaryDirectory '/tmp/tmpnybtrjkj'>
With name having the value 'monai._extensions'
Could be a duplicate of #6167, but the warning seems to be cause by monai and not pytorch if I am no mistaken.
Describe the bug A
ResourceWarning
warning is raised by python as a temporary file seems not to be cleaned properly when importing Monai.To Reproduce
Expected behavior Monai should import itself without triggering warnings
Environment
Additional context The import result in the following warning:
With
name
having the value'monai._extensions'
Could be a duplicate of #6167, but the warning seems to be cause by monai and not pytorch if I am no mistaken.