yiheng-wang-nv
commented
4 months ago Hi @anuragp2018 , could you post the issue in monailabel side? I think the bundle itself runs fine
Open anuragp2018 opened 5 months ago
yiheng-wang-nv
commented
4 months ago Hi @anuragp2018 , could you post the issue in monailabel side? I think the bundle itself runs fine
When I try to run auto segmentation using Slicer, it shows this error.
[2024-06-05 23:59:28,218] [27056] [MainThread] [ERROR] (uvicorn.error:434) - Exception in ASGI application Traceback (most recent call last): File "D:\anaconda3\envs\monailabel\Lib\site-packages\uvicorn\protocols\http\h11_impl.py", line 429, in run_asgi result = await app( # type: ignore[func-returns-value] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\uvicorn\middleware\proxy_headers.py", line 78, in call return await self.app(scope, receive, send) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\fastapi\applications.py", line 276, in call await super().call(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\applications.py", line 122, in call await self.middleware_stack(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\middleware\errors.py", line 184, in call raise exc File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\middleware\errors.py", line 162, in call await self.app(scope, receive, _send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\middleware\cors.py", line 84, in call await self.app(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\middleware\exceptions.py", line 79, in call raise exc File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\middleware\exceptions.py", line 68, in call await self.app(scope, receive, sender) File "D:\anaconda3\envs\monailabel\Lib\site-packages\fastapi\middleware\asyncexitstack.py", line 21, in call raise e File "D:\anaconda3\envs\monailabel\Lib\site-packages\fastapi\middleware\asyncexitstack.py", line 18, in call await self.app(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\routing.py", line 718, in call await route.handle(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\routing.py", line 276, in handle await self.app(scope, receive, send) File "D:\anaconda3\envs\monailabel\Lib\site-packages\starlette\routing.py", line 66, in app response = await func(request) ^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\fastapi\routing.py", line 237, in app raw_response = await run_endpoint_function( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\fastapi\routing.py", line 163, in run_endpoint_function return await dependant.call(**values) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monailabel\endpoints\infer.py", line 206, in api_run_inference return run_inference(background_tasks, model, image, session_id, params, file, label, output) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monailabel\endpoints\infer.py", line 172, in run_inference result = instance.infer(request) ^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monailabel\interfaces\app.py", line 307, in infer result_file_name, result_json = task(request) ^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monailabel\tasks\infer\basic_infer.py", line 307, in call data = self.run_inferer(data, device=device) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monailabel\tasks\infer\basic_infer.py", line 514, in run_inferer outputs = inferer(inputs, network) ^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monai\inferers\inferer.py", line 515, in call return sliding_window_inference( ^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monai\inferers\utils.py", line 161, in sliding_window_inference roi_size = fall_back_tuple(roi_size, imagesize) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monai\utils\misc.py", line 279, in fall_back_tuple user = ensure_tuple_rep(user_provided, ndim) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "D:\anaconda3\envs\monailabel\Lib\site-packages\monai\utils\misc.py", line 205, in ensure_tuple_rep raise ValueError(f"Sequence must have length {dim}, got {len(tup)}.") ValueError: Sequence must have length 2, got 3.