search

Project-Platypus / Platypus

A Free and Open Source Python Library for Multiobjective Optimization
GNU General Public License v3.0
553 stars 152 forks source link

Error in `Missing required option: '--preset <name>'` #207

Closed SamS0218 closed 1 year ago

SamS0218 commented 1 year ago

Hi,

I want to do BCR reertoire analysis using Platypus. I started with Vignettes, and I could do well until 7.2. But I have trouble with using VDJ_mixcr_out <- VDJ_call_MIXCR(VDJ = vgm[[1]], mixcr.directory = "C:/Users/satok/OneDrive/desktop/Platypus",species = "mmu", platypus.version = "v3", operating.system = "Windows", simplify = T)
When I use it, I receive errors as follows. Missing required option: '--preset <name>' Require tsv file type, got tempmixcrhc.out.vdjca Error in file(file, "rt") : cannot open the connection Please let me know how I can solve this problem.

Thank you kindly, Sam.

dhadka commented 1 year ago

Hi, I think you might be referring to https://github.com/sveinbjornt/Platypus, which is a different Python library with the same name. Sorry for the naming confusion!