Closed VectorPosse closed 4 years ago
VectorPosse
commented
4 years ago Also, formulas with two terms are giving weird results too:
library(openintro)
library(mosaic)
prop.test(gender ~ schtyp, data = hsb2)This gives the even more bizarre error:
Error in mosaic_formula_q(x, groups = groups, max.slots = 2) : Invalid formula specification. Too many slots (3>2).
luebby
commented
4 years ago Works ok for me:
suppressPackageStartupMessages(library(openintro))
suppressPackageStartupMessages(library(mosaic))
prop.test(~ schtyp, data = hsb2)
#>
#> 1-sample proportions test with continuity correction
#>
#> data: hsb2$schtyp [with success = public]
#> X-squared = 91.125, df = 1, p-value < 2.2e-16
#> alternative hypothesis: true p is not equal to 0.5
#> 95 percent confidence interval:
#> 0.7800987 0.8864669
#> sample estimates:
#> p
#> 0.84
sessionInfo()
#> R version 4.0.2 (2020-06-22)
#> Platform: x86_64-pc-linux-gnu (64-bit)
#> Running under: Ubuntu 18.04.5 LTS
#>
#> Matrix products: default
#> BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
#> LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
#>
#> locale:
#> [1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C
#> [3] LC_TIME=de_DE.UTF-8 LC_COLLATE=de_DE.UTF-8
#> [5] LC_MONETARY=de_DE.UTF-8 LC_MESSAGES=de_DE.UTF-8
#> [7] LC_PAPER=de_DE.UTF-8 LC_NAME=C
#> [9] LC_ADDRESS=C LC_TELEPHONE=C
#> [11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> other attached packages:
#> [1] mosaic_1.8.2 ggridges_0.5.2 mosaicData_0.20.1
#> [4] ggformula_0.9.4 ggstance_0.3.4 dplyr_1.0.2
#> [7] Matrix_1.2-18 ggplot2_3.3.2 lattice_0.20-41
#> [10] openintro_2.0.0 usdata_0.1.0 cherryblossom_0.1.0
#> [13] airports_0.1.0
#>
#> loaded via a namespace (and not attached):
#> [1] tidyselect_1.1.0 xfun_0.18 purrr_0.3.4 splines_4.0.2
#> [5] colorspace_1.4-1 vctrs_0.3.4 generics_0.0.2 htmltools_0.5.0
#> [9] yaml_2.2.1 rlang_0.4.7 pillar_1.4.6 withr_2.3.0
#> [13] glue_1.4.2 tweenr_1.0.1 plyr_1.8.6 lifecycle_0.2.0
#> [17] mosaicCore_0.8.0 stringr_1.4.0 munsell_0.5.0 gtable_0.3.0
#> [21] htmlwidgets_1.5.2 evaluate_0.14 knitr_1.30 crosstalk_1.1.0.1
#> [25] highr_0.8 broom_0.7.1 Rcpp_1.0.5 readr_1.4.0
#> [29] scales_1.1.1 backports_1.1.10 leaflet_2.0.3 farver_2.0.3
#> [33] gridExtra_2.3 hms_0.5.3 ggforce_0.3.2 digest_0.6.25
#> [37] stringi_1.5.3 ggrepel_0.8.2 polyclip_1.10-0 grid_4.0.2
#> [41] tools_4.0.2 magrittr_1.5 tibble_3.0.3 ggdendro_0.1.22
#> [45] crayon_1.3.4 tidyr_1.1.2 pkgconfig_2.0.3 MASS_7.3-53
#> [49] ellipsis_0.3.1 rmarkdown_2.4 R6_2.4.1 compiler_4.0.2Created on 2020-10-08 by the reprex package (v0.3.0)
Please check if mosaic and mosaicCore are both updated, see https://github.com/ProjectMOSAIC/mosaicCore/issues/32
VectorPosse
commented
4 years ago Okay, yep, that was the problem. I had updated mosaicCore, but not mosaic. My bad. Thanks for the quick response.
On Wed, Oct 7, 2020 at 11:46 PM Karsten Luebke notifications@github.com wrote:
Works ok for me:
suppressPackageStartupMessages(library(openintro)) suppressPackageStartupMessages(library(mosaic)) prop.test(~ schtyp, data = hsb2)#> #> 1-sample proportions test with continuity correction#> #> data: hsb2$schtyp [with success = public]#> X-squared = 91.125, df = 1, p-value < 2.2e-16#> alternative hypothesis: true p is not equal to 0.5#> 95 percent confidence interval:#> 0.7800987 0.8864669#> sample estimates:#> p #> 0.84 sessionInfo()#> R version 4.0.2 (2020-06-22)#> Platform: x86_64-pc-linux-gnu (64-bit)#> Running under: Ubuntu 18.04.5 LTS#> #> Matrix products: default#> BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1#> LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1#> #> locale:#> [1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C #> [3] LC_TIME=de_DE.UTF-8 LC_COLLATE=de_DE.UTF-8 #> [5] LC_MONETARY=de_DE.UTF-8 LC_MESSAGES=de_DE.UTF-8 #> [7] LC_PAPER=de_DE.UTF-8 LC_NAME=C #> [9] LC_ADDRESS=C LC_TELEPHONE=C #> [11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C #> #> attached base packages:#> [1] stats graphics grDevices utils datasets methods base #> #> other attached packages:#> [1] mosaic_1.8.2 ggridges_0.5.2 mosaicData_0.20.1 #> [4] ggformula_0.9.4 ggstance_0.3.4 dplyr_1.0.2 #> [7] Matrix_1.2-18 ggplot2_3.3.2 lattice_0.20-41 #> [10] openintro_2.0.0 usdata_0.1.0 cherryblossom_0.1.0#> [13] airports_0.1.0 #> #> loaded via a namespace (and not attached):#> [1] tidyselect_1.1.0 xfun_0.18 purrr_0.3.4 splines_4.0.2 #> [5] colorspace_1.4-1 vctrs_0.3.4 generics_0.0.2 htmltools_0.5.0 #> [9] yaml_2.2.1 rlang_0.4.7 pillar_1.4.6 withr_2.3.0 #> [13] glue_1.4.2 tweenr_1.0.1 plyr_1.8.6 lifecycle_0.2.0 #> [17] mosaicCore_0.8.0 stringr_1.4.0 munsell_0.5.0 gtable_0.3.0 #> [21] htmlwidgets_1.5.2 evaluate_0.14 knitr_1.30 crosstalk_1.1.0.1#> [25] highr_0.8 broom_0.7.1 Rcpp_1.0.5 readr_1.4.0 #> [29] scales_1.1.1 backports_1.1.10 leaflet_2.0.3 farver_2.0.3 #> [33] gridExtra_2.3 hms_0.5.3 ggforce_0.3.2 digest_0.6.25 #> [37] stringi_1.5.3 ggrepel_0.8.2 polyclip_1.10-0 grid_4.0.2 #> [41] tools_4.0.2 magrittr_1.5 tibble_3.0.3 ggdendro_0.1.22 #> [45] crayon_1.3.4 tidyr_1.1.2 pkgconfig_2.0.3 MASS_7.3-53 #> [49] ellipsis_0.3.1 rmarkdown_2.4 R6_2.4.1 compiler_4.0.2
Created on 2020-10-08 by the reprex package https://reprex.tidyverse.org (v0.3.0)
Please check if mosaic and mosaicCore are both updated, see ProjectMOSAIC/mosaicCore#32 https://github.com/ProjectMOSAIC/mosaicCore/issues/32
— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/ProjectMOSAIC/mosaic/issues/772#issuecomment-705344359, or unsubscribe https://github.com/notifications/unsubscribe-auth/AB3M3H6B5U3ZVNS7ER7GQWTSJVG5FANCNFSM4SIHMNCA .
Reprex:
Gives error message:
Error in tmp[subset] : object of type 'closure' is not subsettableThis worked fine a few days ago before I upgraded to the newest release of mosaic.
I'm using
prop.testa lot with my students over the next week or two, so I'd be grateful to know if there's an obvious fix here.Thanks!