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ProtProtocols / IsoProt

Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering
https://protprotocols.github.io
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Clean source code #61

Closed veitveit closed 5 years ago

veitveit commented 5 years ago

Remove obsolete files

jgriss commented 5 years ago

@veitveit How about renaming Example.ibnyp to TMT Workflow.ibnyp?

In the future, we might have additional notebooks, ie for phospho site analysis. Then, Exambple.ibnyp might not be the best name for it.

veitveit commented 5 years ago

Agreed

On Thu, 23 Aug 2018, 16:04 Johannes Griss, notifications@github.com wrote:

@veitveit https://github.com/veitveit How about renaming Example.ibnyp to TMT Workflow.ibnyp?

In the future, we might have additional notebooks, ie for phospho site analysis. Then, Exambple.ibnyp might not be the best name for it.

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jgriss commented 5 years ago

@veitveit

Files I think can be removed:

veitveit commented 5 years ago

Let's remove these files after the workshop to be on the safe side.

The workflow could also be named "Isobaric Workflow.ipynb" so the missing "iTRAQ" does not confuse.