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ProtProtocols / IsoProt

Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering
https://protprotocols.github.io
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ERROR:root:File `'Scripts/methods_generator.ipy.py'` not found. #62

Closed veitveit closed 5 years ago

veitveit commented 5 years ago

This happens when running the example and pressing the R script button

@jgriss Is there missing a file?

jgriss commented 5 years ago

@veitveit

It should have been added. Unfortunately, I cannot check whether the docker image was already rebuild after the commit. I've just pushed a another change so this should trigger a rebuild again. Also, I'm not rebuilding the image on my side and will test it here.

jgriss commented 5 years ago

@veitveit

I just saw that the docker image building process failed after the last few commits. Unfortunately, I cannot access the build log since that's only possible through the respective user account. Could you have a look to see what went wrong? Simultaneously, I'm now rebuilding it on my side to see if something goes wrong here as well.

On a general note: We should add some kind of notification when the docker image building is failing.

veitveit commented 5 years ago

The Dockerfile was not updated to copy the right notebook file. It should work now (after the image is compiled)