:bug: Fix FragPipe parameter parsing

Proteobench / ProteoBench

ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of proteomics data analysis workflows.

https://proteobench.readthedocs.io

Apache License 2.0

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:bug: Fix FragPipe parameter parsing #302

Closed enryH closed 1 month ago

enryH commented 1 month ago

Windows path in fragpipe_win_path.workflow correctly interpreted on Windows, but will probably fail on UNIX servers...

Start with adding a new test.

Solve issue #285