Calculate coefficient of variation and store information about missing.

Proteobench / ProteoBench

ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of proteomics data analysis workflows. https://proteobench.cubimed.rub.de/

https://proteobench.readthedocs.io

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Calculate coefficient of variation and store information about missing. #40

Closed RobbinBouwmeester closed 11 months ago

viikiid commented 1 year ago

add also to intermediate files

RobbinBouwmeester commented 11 months ago

Is being implemented by @wolski

wolski commented 11 months ago

How about adding mean, 50% 75%, and 95% quantiles of the CVs for each group (A, B) to the datapoint?

RobbinBouwmeester commented 11 months ago

@wolski this is done?

wolski commented 11 months ago

I added the median, Q75, and Q90 of CV to the datapoint result in commit 9632b76454ab45430af181840a5098090d29b8a9.

How do we visualize it?

wolski commented 11 months ago

I think it is done. Visualizing CVs can be a new issue.