Proteogenomics / trackhub-creator

Trackhub creation tool
Apache License 2.0
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The assemblies config has been added from ENSEMBL accession to UCSC #1

Closed ypriverol closed 6 years ago

mbdebian commented 6 years ago

Thanks for the json file @ypriverol , as I mentioned the other day, this data does not belong to the application configuration domain. For the software to apply translation / mapping between Ensembl assemblies and UCSC assemblies, the best way to go, for the benefit of the pipeline architecture, is creating a Translation / Mapping service that will show a uniform interface, with a couple of methods at the beginning to map Ensembl -> UCSC and UCSC -> Ensembl, and different implementation strategies, the first of them will provide the mapping services using the content in this json file, that I'll make available via HTTPS.

Thanks ^_^ Manuel