Suggestions from UCSC genome Browser

[ypriverol]

Suggestions:

• [ ] It mainly could use some default displayed tracks (by adding some "visibility pack" lines).
• [ ] Some track description pages when they are ready (by adding "html path/to/page.html).
• [ ] Also some of the current short and long labels are repeated, but I figure that is because this track is under development.

Specifically here are some suggestions for http://ftp.pride.ebi.ac.uk/pride/data/cluster/trackhubs/latest/rn6/trackDb.txt

track Rat
visibility pack
html http://pathToTrackDescription/page.html
type bigBed 12
bigDataUrl pride_cluster_peptides_10116_Rat.pogo.bb
shortLabel PRIDE Cluster Track - 'Rat' <---this matches the below shortLabel 
longLabel PRIDE Cluster Track for main .bed file, species 'Rat' <-- this matches below longLabel, seems one track (PTM) is about modified proteins, I like the use of thickStart/thickEnd to call out the modified AA

track Rat_with_PTMs
visibility pack
html http://pathToTrackDescription/page.html
type bigBed 12 +
bigDataUrl pride_cluster_peptides_10116_Rat.pogo_ptm.bb
shortLabel PRIDE Cluster Track - 'Rat'
longLabel PRIDE Cluster Track for main .bed file, species 'Rat'

[mbdebian]

Once the first iteration of the tool and its integration is completed, we should have a chat on the feasibility of this.