No package called ‘UniprotR’ after installation

[Xyderal]

Hi. I don't know what I am doing wrong, but

install.packages("UniprotR") Warning in install.packages : dependencies ‘Biostrings’, ‘GenomicAlignments’, ‘IRanges’ are not available also installing the dependency ‘alakazam’

There are binary versions available but the source versions are later: binary source needs_compilation alakazam 0.3.0 1.1.0 TRUE UniprotR 1.2.4 2.0.7 FALSE

Do you want to install from sources the package which needs compilation? (Yes/no/cancel) installing the source packages ‘alakazam’, ‘UniprotR’

trying URL 'https://cran.rstudio.com/src/contrib/alakazam_1.1.0.tar.gz' Content type 'application/x-gzip' length 2474294 bytes (2.4 MB)

downloaded 2.4 MB

trying URL 'https://cran.rstudio.com/src/contrib/UniprotR_2.0.7.tar.gz' Content type 'application/x-gzip' length 29544 bytes (28 KB)

downloaded 28 KB

ERROR: dependencies ‘Biostrings’, ‘GenomicAlignments’, ‘IRanges’ are not available for package ‘alakazam’

• removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/alakazam’ Warning in install.packages : installation of package ‘alakazam’ had non-zero exit status ERROR: dependency ‘alakazam’ is not available for package ‘UniprotR’
• removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/UniprotR’ Warning in install.packages : installation of package ‘UniprotR’ had non-zero exit status

The downloaded source packages are in ‘/private/var/folders/jr/9194sd815yl2zwkz7j2qcy5m0000gn/T/RtmpC3bKdv/downloaded_packages’

library(UniprotR) Error in library(UniprotR) : there is no package called ‘UniprotR’

I would really want to retrieve information from Uniprot for my Master's assignment. I would really appreciate your help Antonio

I am using Rstudio Version 1.1.463 with R version 3.5.3 (2019-03-11) -- "Great Truth" Appreciated

[MohmedSoudy]

Dear @Xyderal the issue is similar to #14, it's recommended to install alakazam version 1.0.0 before installing UniprotR.

[Xyderal]

Thanks! Working perfectly.