Prunoideae / MitoFlex

A mitogenome toolkit inspired by MitoZ, while being more effective, precise and flexible.
GNU General Public License v3.0
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Dev Stabilized Update #1 #1

Closed Prunoideae closed 4 years ago

Prunoideae commented 4 years ago
  1. Added a wrapper for calling megahit directly.
  2. Implemented a filter method for intermediate contigs to concentrate the sequences generated in the run.
  3. Used more strict parameters to fit with mitogenome's features, like ultra high depth and high genome coverage in reads.