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Psy-Fer / buttery-eel

The buttery eel - a slow5 guppy/dorado basecaller wrapper
MIT License
34 stars 2 forks source link

Add some read-id list for selective basecalling #15

Closed Psy-Fer closed 2 months ago

Psy-Fer commented 1 year ago

Allow a user to provide a list of read-ids to basecall.

This will then use random access get calls to pyslow5

hasindu2008 commented 1 year ago

I think this is not that necessary, the user can simply use slow5tools get to generate a BLOW5 file and then call the buttery-eel on that new file.

Psy-Fer commented 1 year ago

indeed, but it means they don't have to generate a new file at all.