Complete Testing for Assembly Result Parsers

Public-Health-Bioinformatics / cpo-pipeline

An analysis pipeline for the purpose of investigating Carbapenemase-Producing Organisms.

MIT License

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Closed dfornika closed 5 years ago

dfornika commented 5 years ago

Sub-task of #7.

Ensure that all result parsers in the assembly module have unit tests with test input data and valid output json files to check against.

bfjia commented 5 years ago

2 new parsers was added: 'parse_reference_genome_stats()' and 'parse_total_bp()' that will need new unit tests