Use Quast-5.* (includes BUSCO)

Public-Health-Bioinformatics / cpo-pipeline

An analysis pipeline for the purpose of investigating Carbapenemase-Producing Organisms.

MIT License

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Closed dfornika closed 5 years ago

dfornika commented 5 years ago

Move to using Quast-5.0, which includes BUSCO. This will eliminate one extra step in post-assembly QC.

dfornika commented 5 years ago

Related: do we pass a reference file to Quast?