In this PR I add logic to retrieve and use any EFS study. Users can select the EFS case (reference, medium, high) and speed (slow, moderate, rapid) from the config file.
Checklist
[x] I tested my contribution locally and it seems to work fine.
[x] Code and workflow changes are sufficiently documented.
[ ] Changed dependencies are added to envs/environment.yaml.
[ ] Changes in configuration options are added in all of config.default.yaml.
[ ] Changes in configuration options are also documented in doc/configtables/*.csv.
Closes #363
Changes proposed in this Pull Request
In this PR I add logic to retrieve and use any EFS study. Users can select the EFS case (
reference,medium,high) and speed (slow,moderate,rapid) from the config file.Checklist
envs/environment.yaml.config.default.yaml.doc/configtables/*.csv.