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PyProphet / pyprophet

PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
http://www.openswath.org
BSD 3-Clause "New" or "Revised" License
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False None-Discovery Rate (FNR) and pFNR #2

Closed grosenberger closed 7 years ago

grosenberger commented 7 years ago

This pull request implements the FNR and pFNR according to the following two references:

  1. Storey, J. D. A direct approach to false discovery rates. J. R. Statist. Soc. B 64, 479–498 (2002).
  2. Storey, J. D. The positive false discovery rate: A Bayesian interpretation and the q-value. Ann. Stat. 31, 2013–2035 (2003).