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PyProphet / pyprophet

PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
http://www.openswath.org
BSD 3-Clause "New" or "Revised" License
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[FEATURE] Export: Split for Requant #21

Closed grosenberger closed 6 years ago

grosenberger commented 6 years ago

This PR improves compatibility with TRIC/requant by writing separate TSV reports.

hroest commented 6 years ago

looks like the column orders are now different:

>   -    cutoff  pvalue  qvalue  svalue        tp       fp       tn       fn     fpr     fdr     fnr     pep

>   +    cutoff     fdr       fn     fnr       fp     fpr  pvalue  qvalue  svalue       tn        tp     pep
grosenberger commented 6 years ago

Replaced by #24