search

QCDIS / NaaVRE-flavors

Flavors of NaaVRE
Apache License 2.0
0 stars 0 forks source link

Create biotope flavor #25

Closed gpelouze closed 6 months ago

gpelouze commented 6 months ago

Create a new biotope flavor with:

name: biotope
channels:
  - conda-forge
dependencies:
  - r-irkernel
  - r-jsonlite
  - r-optparse
  - r=4.1.0
  - python=3.10
  - ipykernel
  - pip
  - openssl
  - curl
  - wget
  - cmake
  - r-shiny
  - r-knitr
  - r-devtools
  - r-optparse
  - r-tidyverse
  - r-here
  - r-rgbif=3.6.0
  - r-lubridate  
  - r-base
  - r-glue
  - r-RSQLite
  - r-sp
  - r-data.table
  - zip
  - unzip
  - pandas
  - gdal
  - pyproj
  - shapely
RUN R -e devtools::install_github('trias-project/trias@5d0f27f76567c0d11021a3055c32ec521622ca36')
gpelouze commented 6 months ago

Linked PR contains the conda env and the compiled OTB files.

trias is not included in the cell base at the moment. (It can neither be installed in the build image because it disrupts conda-pack, nor in the runtime image because the it doesn’t have the conda env.)