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QEWD-Courier / Ripple-Qewd

Node.js based middleware- for Ripple showcase stack
Apache License 2.0
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QEWD - Test Results - Data not being populated #38

Open dkryvosheya opened 7 years ago

dkryvosheya commented 7 years ago

not particularly QEWD-related, it's related to ethercis in this case - database doesn't contain the information for us to show, please check the screenshot attached: http://prntscr.com/fhc019;

tony-shannon commented 7 years ago

Sounds like it should be resolved via QEWD Ripple Please link to issue there Tony

On 14 June 2017 at 12:54, dkryvosheya notifications@github.com wrote:

not particularly QEWD-related, it's related to ethercis in this case - database doesn't contain the information for us to show, please check the screenshot attached: http://prntscr.com/fhc019;

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robtweed commented 7 years ago

Fixed now on 245

tony-shannon commented 7 years ago

Sorry Rob Comments here need to be clearer, so these issues can be understood when being reviewed later. 245 wont mean anything to others. Do you mean you've retested on the http://dev1.ripple.foundation/ box and its working ok?

thanks Tony

On 15 June 2017 at 16:35, robtweed notifications@github.com wrote:

Fixed now on 245

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robtweed commented 7 years ago

Yes it's fixed on the dev machine and the fix will be pushed out in the next update to the repo. It was due to an old Ethercis SQL file still hanging around in the headings directory.

tony-shannon commented 7 years ago

ok, just checked.. working better but still not seeing any test details see here image Are there any numerical lab values being passed from EtherCIS? that should be available to the UI?

tony-shannon commented 7 years ago

waiting for detail re test details eg numberic lab values etc

robtweed commented 7 years ago

According to Ian the Ethercis issue is a known problem - it's returning the lab results as a string containing JSON instead of the JSON itself. I understand that Christian is aware of the issue

tony-shannon commented 7 years ago

OK thanks Rob Can u check what issue that is listed under on the EtherCIS related repo and link to that here please? https://github.com/RippleOSI/Ripple-openEHR/issues T

On 20 June 2017 at 16:11, robtweed notifications@github.com wrote:

According to Ian the Ethercis issue is a known problem - it's returning the lab results as a string containing JSON instead of the JSON itself. I understand that Christian is aware of the issue

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robtweed commented 7 years ago

I don't believe it's recorded as an issue on Ripple-openEHR. Ian posted a PR on Assembla for Christian

tony-shannon commented 7 years ago

thanks Will chase up with Ian & close when sorted Thanks

tony-shannon commented 7 years ago

@freshehr can u update when this is done please

robtweed commented 7 years ago

Test results now being retrieved, but there's an outstanding issue relating to the display of the test panel which, in turn, is associated with the way the Comment is being retrieved from OpenEHR

tony-shannon commented 7 years ago

have chased Ian up on way to resolve this.. thanks

freshehr commented 7 years ago

I think this is an EtherCis issue with the resultset- commented elsewhere

tony-shannon commented 7 years ago

thanks Ian Can you suggest what we do on this please? thanks T

On 30 June 2017 at 17:23, Ian McNicoll notifications@github.com wrote:

I think this is an EtherCis issue with the resultset- commented elsewhere

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freshehr commented 7 years ago

I think there are 2 issues here...

  1. Ethercis is not correctly populating the first lab result in a lab panel. The comment is correct (it is a comment on the individual lab result which is missing. The raw composition looks like this (First lab result in the panel).

      "items": [
                        {
                            "@class": "ELEMENT",
                            "name": {
                                "@class": "DV_CODED_TEXT",
                                "value": "total protein measurement",
                                "defining_code": {
                                    "@class": "CODE_PHRASE",
                                    "terminology_id": {
                                        "@class": "TERMINOLOGY_ID",
                                        "value": "SNOMED-CT"
                                    },
                                    "code_string": "304383000"
                                }
                            },
                            "archetype_node_id": "at0001",
                            "value": {
                                "@class": "DV_QUANTITY",
                                "normal_range": {
                                    "@class": "DV_INTERVAL",
                                    "lower": {
                                        "@class": "DV_QUANTITY",
                                        "magnitude": 60,
                                        "units": "g/l"
                                    },
                                    "upper": {
                                        "@class": "DV_QUANTITY",
                                        "magnitude": 80,
                                        "units": "g/l"
                                    },
                                    "lower_unbounded": false,
                                    "upper_unbounded": false
                                },
                                "magnitude": 87,
                                "units": "g/l"
                            }
                        },
                        {
                            "@class": "ELEMENT",
                            "name": {
                                "@class": "DV_TEXT",
                                "value": "Comment"
                            },
                            "archetype_node_id": "at0003",
                            "value": {
                                "@class": "DV_TEXT",
                                "value": "raised level"
                            }t
                        }
                    ]
                },

    In the returned resultset, the 'total protein measurement node is missing'. - Actually in the real Ethercis example it is a 'urea' node.

  2. I suspect QEWD is assuming that there is only a single node within each lab result structure. In fact there is the result value itself plus an optional comment.

tony-shannon commented 7 years ago

@freshehr

Can you suggest the action needed here please? assume @ethercis needs to tackle?

thanks T

PhilBarrett commented 7 years ago

@tony-shannon reviewed. @freshehr Comments are still not displaying as intended, could you provide a brief update please, thanks.

tony-shannon commented 6 years ago

refreshing outstanding issues

@freshehr could you take another look at this please?

freshehr commented 6 years ago

This should now be fixed as far as I can tell. The resultset structure seems correct me.

Thee are still some issues with handling resultset objects generally- See https://github.com/RippleOSI/Ripple-openEHR/issues/8

tony-shannon commented 6 years ago

This looks to be working better now , see results & comments in screenshot. image

So Im going to close this issue for now

Tony

freshehr commented 6 years ago

There should be some normal ranges coming through - that worked before.

"archetype_node_id": "at0001", "value": { "@class": "DV_QUANTITY", "normal_range": { "@class": "DV_INTERVAL", "lower": { "@class": "DV_QUANTITY", "magnitude": 2.5, "units": "mmol/l" }, "upper": { "@class": "DV_QUANTITY", "magnitude": 6.6, "units": "mmol/l" }, "lower_unbounded": false, "upper_unbounded": false }, "magnitude": 7.4, "units": "mmol/l" } },

tony-shannon commented 6 years ago

thanks Ian Which record should that be seen in ? T

On 16 October 2017 at 15:16, Ian McNicoll notifications@github.com wrote:

There should be some normal ranges coming through - that worked before.

"archetype_node_id": "at0001", "value": { "@Class https://github.com/class": "DV_QUANTITY", "normal_range": { "@Class https://github.com/class": "DV_INTERVAL", "lower": { "@Class https://github.com/class": "DV_QUANTITY", "magnitude": 2.5, "units": "mmol/l" }, "upper": { "@Class https://github.com/class": "DV_QUANTITY", "magnitude": 6.6, "units": "mmol/l" }, "lower_unbounded": false, "upper_unbounded": false }, "magnitude": 7.4, "units": "mmol/l" } },

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freshehr commented 6 years ago

Resultset for the AQL

{
    "meta": {
        "href": "http://test.operon.systems/rest/v1/query/?aql=select%20%20%20a/uid/value%20as%20uid,%20%20%20a/composer/name%20as%20author,%20%20%20a/context/start_time/value%20as%20date_created,%20%20%20a_a/data%5Bat0001%5D/events%5Bat0002%5D/data%5Bat0003%5D/items%5Bat0005%5D/value/value%20as%20test_name,%20%20%20a_a/data%5Bat0001%5D/events%5Bat0002%5D/data%5Bat0003%5D/items%5Bat0057%5D/value/value%20as%20conclusion,%20%20%20a_a/data%5Bat0001%5D/events%5Bat0002%5D/data%5Bat0003%5D/items%5Bat0073%5D/value/value%20as%20status,%20%20%20a_a/data%5Bat0001%5D/events%5Bat0002%5D/data%5Bat0003%5D/items%5Bat0075%5D/value/value%20as%20sample_taken,%20%20%20a_a/data%5Bat0001%5D/events%5Bat0002%5D/data%5Bat0003%5D/items%5BopenEHR-EHR-CLUSTER.laboratory_test_panel.v0%5D%20as%20test_panel%20%20%20from%20EHR%20e%20contains%20COMPOSITION%20a%5BopenEHR-EHR-COMPOSITION.report-result.v1%5D%20%20%20contains%20OBSERVATION%20a_a%5BopenEHR-EHR-OBSERVATION.laboratory_test.v0%5D"
    },
    "aql": "select   a/uid/value as uid,   a/composer/name as author,   a/context/start_time/value as date_created,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0005]/value/value as test_name,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0057]/value/value as conclusion,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0073]/value/value as status,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0075]/value/value as sample_taken,   a_a/data[at0001]/events[at0002]/data[at0003]/items[openEHR-EHR-CLUSTER.laboratory_test_panel.v0] as test_panel   from EHR e contains COMPOSITION a[openEHR-EHR-COMPOSITION.report-result.v1]   contains OBSERVATION a_a[openEHR-EHR-OBSERVATION.laboratory_test.v0]",
    "executedAql": "select   a/uid/value as uid,   a/composer/name as author,   a/context/start_time/value as date_created,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0005]/value/value as test_name,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0057]/value/value as conclusion,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0073]/value/value as status,   a_a/data[at0001]/events[at0002]/data[at0003]/items[at0075]/value/value as sample_taken,   a_a/data[at0001]/events[at0002]/data[at0003]/items[openEHR-EHR-CLUSTER.laboratory_test_panel.v0] as test_panel   from EHR e contains COMPOSITION a[openEHR-EHR-COMPOSITION.report-result.v1]   contains OBSERVATION a_a[openEHR-EHR-OBSERVATION.laboratory_test.v0]",
    "resultSet": [
        {
            "conclusion": "Rapidly deteriorating renal function",
            "uid": "c8476571-2601-47e9-a794-dc888939dffd::hcbox.oprn.ehrscape.com::1",
            "test_panel": {
                "@class": "CLUSTER",
                "name": {
                    "@class": "DV_TEXT",
                    "value": "Laboratory test panel"
                },
                "archetype_details": {
                    "@class": "ARCHETYPED",
                    "archetype_id": {
                        "@class": "ARCHETYPE_ID",
                        "value": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0"
                    },
                    "rm_version": "1.0.1"
                },
                "archetype_node_id": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0",
                "items": [
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Urea",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "365755003"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 2.5,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 6.6,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 6.7,
                                    "units": "mmol/l"
                                }
                            },
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_TEXT",
                                    "value": "Comment"
                                },
                                "archetype_node_id": "at0003",
                                "value": {
                                    "@class": "DV_TEXT",
                                    "value": "may be technical artefact"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #2"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Creatinine",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "70901006"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 80,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 110,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 115,
                                    "units": "mmol/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #3"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Sodium",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "365761000"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 133,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 146,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 177,
                                    "units": "mmol/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #4"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "365760004",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "Potassium"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 3.5,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 5.3,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 5.8,
                                    "units": "mmol/l"
                                }
                            }
                        ]
                    }
                ]
            },
            "author": "Dr Lab",
            "date_created": "2015-07-23T00:11:02.518+02:00",
            "sample_taken": "2015-07-23T00:11:02.518+02:00",
            "test_name": "Urea, electrolytes and creatinine measurement",
            "status": "Final"
        },
        {
            "conclusion": "Rapidly deteriorating renal function",
            "uid": "c605b86e-96ac-4e3f-9736-843c9d75b92e::hcbox.oprn.ehrscape.com::1",
            "test_panel": {
                "@class": "CLUSTER",
                "name": {
                    "@class": "DV_TEXT",
                    "value": "Laboratory test panel"
                },
                "archetype_details": {
                    "@class": "ARCHETYPED",
                    "archetype_id": {
                        "@class": "ARCHETYPE_ID",
                        "value": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0"
                    },
                    "rm_version": "1.0.1"
                },
                "archetype_node_id": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0",
                "items": [
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Urea",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "365755003"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 2.5,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 6.6,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 7.4,
                                    "units": "mmol/l"
                                }
                            },
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_TEXT",
                                    "value": "Comment"
                                },
                                "archetype_node_id": "at0003",
                                "value": {
                                    "@class": "DV_TEXT",
                                    "value": "may be technical artefact"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #2"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Creatinine",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "70901006"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 80,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 110,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 127,
                                    "units": "mmol/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #3"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Sodium",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "365761000"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 133,
                                            "units": "mmol/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 146,
                                            "units": "mmol/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 135,
                                    "units": "mmol/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #4"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "Potassium",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "365760004"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
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                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "61928009",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "platelet count"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 140,
                                            "units": "10*9/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 400,
                                            "units": "10*9/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 587,
                                    "units": "10*9/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #5"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "271026005",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "heamoglobin level estimation"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 130,
                                            "units": "g/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 180,
                                            "units": "g/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 137,
                                    "units": "g/l"
                                }
                            }
                        ]
                    }
                ]
            },
            "author": "Dr Lab",
            "date_created": "2015-08-19T00:11:02.518+02:00",
            "sample_taken": "2015-08-25T00:11:02.518+02:00",
            "test_name": "complete blood count",
            "status": "Final"
        },
        {
            "conclusion": "normal result",
            "uid": "0e4f64b5-f91e-4fa3-b8b5-e820a7f01ac3::hcbox.oprn.ehrscape.com::1",
            "test_panel": {
                "@class": "CLUSTER",
                "name": {
                    "@class": "DV_TEXT",
                    "value": "Laboratory test panel"
                },
                "archetype_details": {
                    "@class": "ARCHETYPED",
                    "archetype_id": {
                        "@class": "ARCHETYPE_ID",
                        "value": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0"
                    },
                    "rm_version": "1.0.1"
                },
                "archetype_node_id": "openEHR-EHR-CLUSTER.laboratory_test_panel.v0",
                "items": [
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "white blood cell count",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "767002"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 3.6,
                                            "units": "10*9/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 11,
                                            "units": "10*9/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 9.8,
                                    "units": "10*9/l"
                                }
                            },
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_TEXT",
                                    "value": "Comment"
                                },
                                "archetype_node_id": "at0003",
                                "value": {
                                    "@class": "DV_TEXT",
                                    "value": "this is a normal result"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #2"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "neutrophil count",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "30630007"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 1.8,
                                            "units": "10*9/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 7.5,
                                            "units": "10*9/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 5.8,
                                    "units": "10*9/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #3"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "lymphocyte count",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "74765001"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 1,
                                            "units": "10*9/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 4,
                                            "units": "10*9/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 2.2,
                                    "units": "10*9/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #4"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "61928009",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "platelet count"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 140,
                                            "units": "10*9/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 400,
                                            "units": "10*9/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 237,
                                    "units": "10*9/l"
                                }
                            }
                        ]
                    },
                    {
                        "@class": "CLUSTER",
                        "name": {
                            "@class": "DV_TEXT",
                            "value": "Laboratory result #5"
                        },
                        "archetype_node_id": "at0002",
                        "items": [
                            {
                                "@class": "ELEMENT",
                                "name": {
                                    "@class": "DV_CODED_TEXT",
                                    "value": "271026005",
                                    "defining_code": {
                                        "@class": "CODE_PHRASE",
                                        "terminology_id": {
                                            "@class": "TERMINOLOGY_ID",
                                            "value": "SNOMED-CT"
                                        },
                                        "code_string": "heamoglobin level estimation"
                                    }
                                },
                                "archetype_node_id": "at0001",
                                "value": {
                                    "@class": "DV_QUANTITY",
                                    "normal_range": {
                                        "@class": "DV_INTERVAL",
                                        "lower": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 130,
                                            "units": "g/l"
                                        },
                                        "upper": {
                                            "@class": "DV_QUANTITY",
                                            "magnitude": 180,
                                            "units": "g/l"
                                        },
                                        "lower_unbounded": false,
                                        "upper_unbounded": false
                                    },
                                    "magnitude": 177,
                                    "units": "g/l"
                                }
                            }
                        ]
                    }
                ]
            },
            "author": "Dr Lab",
            "date_created": "2015-03-22T00:11:02.518+02:00",
            "sample_taken": "2015-06-13T00:11:02.518+02:00",
            "test_name": "complete blood count",
            "status": "Final"
        }
    ]
}
tony-shannon commented 6 years ago

Yikes @freshehr Meant which test patient record should I see it? eg Ivor Cox U&E on x date?

freshehr commented 6 years ago

Yup - should be on Ivor;s record - FBC, Lipids and U and E.

"author": "Dr Lab", "date_created": "2015-03-22T00:11:02.518+02:00", "sample_taken": "2015-02-22T00:11:02.518+02:00", "ehrId": "dabcbf61-94bb-45df-a472-9c7a489a200d", => Ivor Cox "test_name": "Urea, electrolytes and creatinine measurement", "status": "Final"

tony-shannon commented 6 years ago

Sorry Ian Not seeing that at the UI level

image

@robtweed could you confirm your seeing the unit ranges for this result in the middleware and the issue must be a PulseTile one? thanks