QIB-Sheffield / wezel

Prototyping quantitative medical imaging applications
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'Wezel' object has no attribute 'set_menu' #81

Open JoaoPeriquito opened 1 year ago

JoaoPeriquito commented 1 year ago

When I call "wzl.set_menu(iBEATdev)" the following message appears: 'Wezel' object has no attribute 'setmenu' - I am wondering if the way to set custom menus has changed.

plaresmedima commented 1 year ago

Yes it has - I had corrected that in exec.py - does this appear somewhere else?

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 11:09, JoaoPeriquito @.***> wrote:

When I call "wzl.set_menu(iBEAT_dev)" the following message appears: 'Wezel' object has no attribute 'set_menu' - I am wondering if the way to set custom menus has changed.

— Reply to this email directly, view it on GitHub https://github.com/QIB-Sheffield/wezel/issues/81, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABOFKA6H6TZ2SDDUBSNOHLLW5A3IHANCNFSM6AAAAAAWA5YXRU . You are receiving this because you are subscribed to this thread.Message ID: @.***>

JoaoPeriquito commented 1 year ago

Everything seems to be fine if I use the default menu from wezel. I was just trying to use wezel together with our ibeat menu by doing an editable install and executing it.

On Mon, Mar 20, 2023 at 11:12 AM Steven Sourbron @.***> wrote:

Yes it has - I had corrected that in exec.py - does this appear somewhere else?

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron:// www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page < https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging

Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 11:09, JoaoPeriquito @.***> wrote:

When I call "wzl.set_menu(iBEAT_dev)" the following message appears: 'Wezel' object has no attribute 'set_menu' - I am wondering if the way to set custom menus has changed.

— Reply to this email directly, view it on GitHub https://github.com/QIB-Sheffield/wezel/issues/81, or unsubscribe < https://github.com/notifications/unsubscribe-auth/ABOFKA6H6TZ2SDDUBSNOHLLW5A3IHANCNFSM6AAAAAAWA5YXRU

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plaresmedima commented 1 year ago

Yes have you tried using the exec.py function which is in iBEAt?

On Mon, 20 Mar 2023, 12:00 JoaoPeriquito, @.***> wrote:

Everything seems to be fine if I use the default menu from wezel. I was just trying to use wezel together with our ibeat menu by doing an editable install and executing it.

On Mon, Mar 20, 2023 at 11:12 AM Steven Sourbron @.***> wrote:

Yes it has - I had corrected that in exec.py - does this appear somewhere else?

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron:// www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page <

https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging

Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 11:09, JoaoPeriquito @.***> wrote:

When I call "wzl.set_menu(iBEAT_dev)" the following message appears: 'Wezel' object has no attribute 'set_menu' - I am wondering if the way to set custom menus has changed.

— Reply to this email directly, view it on GitHub https://github.com/QIB-Sheffield/wezel/issues/81, or unsubscribe <

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JoaoPeriquito commented 1 year ago

For testing wezel alone, I was using wezel exec.py all - all fine . For testing wezel with iBEAt menu, I was using iBEAt exec.py - from where I got the described error

On Mon, Mar 20, 2023 at 2:20 PM Steven Sourbron @.***> wrote:

Yes have you tried using the exec.py function which is in iBEAt?

On Mon, 20 Mar 2023, 12:00 JoaoPeriquito, @.***> wrote:

Everything seems to be fine if I use the default menu from wezel. I was just trying to use wezel together with our ibeat menu by doing an editable install and executing it.

On Mon, Mar 20, 2023 at 11:12 AM Steven Sourbron @.***> wrote:

Yes it has - I had corrected that in exec.py - does this appear somewhere else?

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron:// www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page <

https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging

Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 11:09, JoaoPeriquito @.***> wrote:

When I call "wzl.set_menu(iBEAT_dev)" the following message appears: 'Wezel' object has no attribute 'set_menu' - I am wondering if the way to set custom menus has changed.

— Reply to this email directly, view it on GitHub https://github.com/QIB-Sheffield/wezel/issues/81, or unsubscribe <

https://github.com/notifications/unsubscribe-auth/ABOFKA6H6TZ2SDDUBSNOHLLW5A3IHANCNFSM6AAAAAAWA5YXRU

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plaresmedima commented 1 year ago

are you checking the pull request? I assigned you as reviewer

https://github.com/QIB-Sheffield/iBEAt/pull/21

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 14:32, JoaoPeriquito @.***> wrote:

For testing wezel alone, I was using wezel exec.py all - all fine . For testing wezel with iBEAt menu, I was using iBEAt exec.py - from where I got the described error

On Mon, Mar 20, 2023 at 2:20 PM Steven Sourbron @.***> wrote:

Yes have you tried using the exec.py function which is in iBEAt?

On Mon, 20 Mar 2023, 12:00 JoaoPeriquito, @.***> wrote:

Everything seems to be fine if I use the default menu from wezel. I was just trying to use wezel together with our ibeat menu by doing an editable install and executing it.

On Mon, Mar 20, 2023 at 11:12 AM Steven Sourbron @.***> wrote:

Yes it has - I had corrected that in exec.py - does this appear somewhere else?

Prof. Steven Sourbron, PhD Chair in Medical Imaging Physics University of Sheffield, UK https https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron :// www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron <https://www.sheffield.ac.uk/medicine/people/iicd/steven-sourbron Sheffield abdominal imaging research page <

https://www.sheffield.ac.uk/medicine/research/research-themes/medical-imaging/medical-imaging-research/abdominal-imaging

Open source initiative in perfusion imaging http://www.osipi.org Magnetic resonance imaging biomarkers for chronic kidney disease https://renalmri.org/

On Mon, 20 Mar 2023 at 11:09, JoaoPeriquito @.***> wrote:

When I call "wzl.set_menu(iBEAT_dev)" the following message appears: 'Wezel' object has no attribute 'set_menu' - I am wondering if the way to set custom menus has changed.

— Reply to this email directly, view it on GitHub https://github.com/QIB-Sheffield/wezel/issues/81, or unsubscribe <

https://github.com/notifications/unsubscribe-auth/ABOFKA6H6TZ2SDDUBSNOHLLW5A3IHANCNFSM6AAAAAAWA5YXRU

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