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QIFEIDKN / STAGATE

Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
MIT License
35 stars 18 forks source link

Tensorflow version #1

Closed Yao-14 closed 2 years ago

Yao-14 commented 2 years ago

Hello, I am very interested in your package, and I hope to try your package to process data. But I see that your package requires tensorflow==1.15.0. Is this necessary? Can I use tensorflow==2.7.0

QIFEIDKN commented 2 years ago

Sorry, STAGATE only supports Tensorflow 1.xx currently. You can downgrade it by pip install tensorflow-gpu==1.15.0.

Yao-14 commented 2 years ago

Thanks. My CUDA version is 11.3, so can I use the CPU version of tensorflow?I am worried that tensorflow-gpu==1.15.0 cannot be used.

forechoandlook commented 2 years ago

Thanks. My CUDA version is 11.3, so can I use the CPU version of tensorflow?I am worried that tensorflow-gpu==1.15.0 cannot be used.

Actually You can use Colab! This is our reproducation result on Colab https://drive.google.com/drive/folders/1fkZZgXp-lQpWVbQi3HsHuoR3GeSLaGjp. The reproductation is the version.