about DLPFC 151508 - Githubissues

QIFEIDKN / STAGATE

Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics

MIT License

36 stars 19 forks source link

about DLPFC 151508 #17

Closed xiao-kong-long closed 1 year ago

xiao-kong-long commented 1 year ago

Dear developer, I have met a problem in DLPFC 151508 : the number of spots reading from filtered h5 file is 4182, which is not matching the number from ground_truth you have provided that have 4384 elements, I don't know if I downloaded wrong file ? Best Wishes.

xiao-kong-long commented 1 year ago

I find the reason, because I filtered those spots that are not in tissue, as follows: