Mapping of segmentation slices to source series instances is inadequate

QIICR / dcmqi

dcmqi (DICOM for Quantitative Imaging) is a free, open source C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

https://qiicr.gitbook.io/dcmqi-guide/

BSD 3-Clause "New" or "Revised" License

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Mapping of segmentation slices to source series instances is inadequate #449

Closed fedorov closed 2 years ago

fedorov commented 2 years ago

The current approach makes the assumption that all images that are passed to the itkimage2segimage converter have the same geometry. This will not work with the current approach used in Slicer that defines segmentation image geometry to be that of the slices segmented. When a single slice is segmented, the exported segmentation will contain only one slice, and no blank slices. This was identified while following up on https://github.com/OHIF/Viewers/issues/2733.

fedorov commented 2 years ago

should be resolved by the PR above