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R-Vessel-X / SlicerRVXLiverSegmentation

3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X
BSD 2-Clause "Simplified" License
32 stars 7 forks source link

A couple difficulties #12

Closed infaredoctopus closed 1 year ago

infaredoctopus commented 1 year ago

I'm encountering a couple problems when I try and use the extension. Firstly, when I open an isotropic cropped dataset the volume viewer does not render anything, and I have to manually select the source volume in segment editor, but if I open the full CT dataset with the cropped datatset it will render and it recognises the source volume. Secondly, I'm receiving the error message attached that means that I'm not able to proceed past the portal veins tab. Any help would be much appreciated. Thanks :)

Screen Shot 2022-12-12 at 2 32 10 pm

Thibault-Pelletier commented 1 year ago

Hi @infaredoctopus ,

Thank you for reaching out. Your problem seems to be a duplicate of the issue #11.

As mentioned in this other thread, I just pushed a fix for this issue. To test this fix, you can either download the code and follow the manual instruction (https://github.com/R-Vessel-X/SlicerRVXLiverSegmentation#manually-installing-the-plugin) or you can wait for the plugin to be updated on Slicer's extension which should take a few days.

For the cropped DICOM loading problem, it may come from when you load / generate the data vs when the module is opened. If the module is first opened before loading the data, or the data is loaded from the volume, it should be loaded properly.

I added another change to have a "None" volume as the default. It should make it more explicit which volume is currently set for the module.

Please let me know if you have further problems / questions regarding the extension.