RADar-AZDelta / Rabbit-in-a-Blender

An ETL pipeline to transform your EMP data to OMOP.
https://radar-azdelta.github.io/Rabbit-in-a-Blender/
GNU General Public License v3.0
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Check for non-standard codes in usagi files #43

Closed sieldep closed 5 months ago

sieldep commented 5 months ago

Would it be possible to add a check in riab, so that it gives an error or warning when non-standard concepts were chosen?

We noticed that by updating the vocabularies to the most recent version, some concepts were changed to non-standard. It would be useful if riab would check for these codes.

pjlammertyn commented 5 months ago

solved in commit https://github.com/RADar-AZDelta/Rabbit-in-a-Blender/commit/d4b20ee2fb9dfbd849305f21f867293ea752fa4c