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RConsortium / submissions-pilot3-adam

Development repo for pilot3 submission to FDA - ADaM
https://rconsortium.github.io/submissions-pilot3-adam/
GNU General Public License v3.0
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create {targets} pipeline #96

Closed laxamanaj closed 1 year ago

laxamanaj commented 1 year ago

follow video in walkthrough : https://books.ropensci.org/targets/walkthrough.html

thomas-neitmann commented 1 year ago

I did look into this and I don't think it's a viable solution for us. {targets} requires everything to be encapsulated into functions, so instead of a ADSL script we'd need to have an ADSL function (and the same for all other ADaMs and TLGs). There are other workflow tools like snakemake out there which work on scripts but I didn't manage to install them in the Posit Cloud.

laxamanaj commented 1 year ago

Thanks for looking into this, @thomas-neitmann . I'll look into snakemake.

laxamanaj commented 1 year ago

I realized this is related to #68. will continue discussion there.