Add the options to save plots generated with RAMClustR in a collection of PDFs
The filtering part creates the MSData output - the filtering section should also be made available in the wrapper with 2 options:
blank
cv
both of them being a boolean and both can be selected.
If blank is selected, the parameters for the function need to be added (qc.tag, blank.tag, signal_to_noise (sn) and remove.blanks (boolean)).
None means that the filtering is disabled.
CV requires a qc.tag and a cv value (coefficient of variation).
The order of execution is filtering blanks < normalization < filtering cv.
The filtering step creates the following output
The rc.qc. function should be added - this should be added as a boolean.
It is executed as last step of the workflow.
The rc.qc function creates the following output :
Add the options to save plots generated with RAMClustR in a collection of PDFs
The filtering part creates the MSData output - the filtering section should also be made available in the wrapper with 2 options:
If blank is selected, the parameters for the function need to be added (qc.tag, blank.tag, signal_to_noise (sn) and remove.blanks (boolean)). None means that the filtering is disabled. CV requires a
qc.tagand acvvalue (coefficient of variation). The order of execution is filtering blanks < normalization < filtering cv.The filtering step creates the following output
The rc.qc. function should be added - this should be added as a boolean. It is executed as last step of the workflow. The rc.qc function creates the following output :