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RECETOX / galaxytools

Set of Galaxy tool wrappers developed at RECETOX
MIT License
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Handle string sanitzing in matchms add key tool #481

Closed hechth closed 7 months ago

hechth commented 8 months ago

Currently, characters like [ are replaced with __ob__ etc. which makes it difficult to use the tool. This should be handled, as other tools such as replace etc. can actually handle these things.

bgruening commented 8 months ago

Its a feature not a bug :)

Galaxy is sanitizing inputs by default. For security. Ideally you design your tools in a way that you do not need those more dangerous inputs. If this is not possible, you can add / tweak the sanitizing with https://docs.galaxyproject.org/en/latest/dev/schema.html#tool-inputs-param-sanitizer