search

RECETOX / recetox-xMSannotator

This is a custom adaptation of the original version of xMSannotator. It is a complete rewrite of the original functionality, following the same program structure.
GNU General Public License v3.0
5 stars 5 forks source link

Allow other input formats #109

Closed xtrojak closed 1 year ago

xtrojak commented 1 year ago

Generalise functions for reading inputs to allow more formats (for example csv). Alternatively, export the preprocessing functions as_peak_table, as_compound_table, and as_adduct_table and handle this by external tools (e.g. within Galaxy).

xtrojak commented 1 year ago

Actually, the mentioned preprocessing functions are used in advanced_annotation, so there is no reason to export them. Therefore, files in any format can be read and passed to it.