search

RGLab / MAST

Tools and methods for analysis of single cell assay data in R
226 stars 57 forks source link

glmer is still broken in test.zlm #32

Closed amcdavid closed 10 years ago

amcdavid commented 11 years ago

The "continuous" portion of the object isn't being initialized correctly.

amcdavid commented 11 years ago

Upon further inspection, I'm not totally convinced that lmer 1.0 is completely baked. I'm getting lots of strange errors from drop1 that appear to originate from lmer internals. Perhaps we should just revert everything to .9999 until things settle down.

gfinak commented 11 years ago

To expand: lmer 1.0-5 is the current CRAN release. Short of a reproducible example and an answer from Doug Bates that says "yes you've found a bug", I'm not convinced we should not support it. Post some code and let's sort it out. Maybe there's another way to accomplish what you need to do. If we rely on an older version, folks will need to dig into the archives to install it and that's not always accessible to everyone.

On Oct 30, 2013 9:34 AM, "Andrew McDavid" notifications@github.com wrote:

Upon further inspection, I'm not totally convinced that lmer 1.0 is completely baked. I'm getting lots of strange errors from drop1 that appear to originate from lmer internals. Perhaps we should just revert everything to .9999 until things settle down.

— Reply to this email directly or view it on GitHubhttps://github.com/RGLab/SingleCellAssay/issues/32#issuecomment-27408414 .

amcdavid commented 10 years ago

Closed in f82213f0