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RGLab / QUALIFIER

Qualitiy control for gated flow cytometry data
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replace read.csv with fread #41

Closed mikejiang closed 10 years ago

mikejiang commented 10 years ago

As @kevinushey suggested for openCyto package, fread is more robust in terms of detecting column separator, which will be useful for QUALIFIER to load meta data and qa task list from csv.

gfinak commented 10 years ago

Just beware that the resulting data.table has different syntax to do the same things with the underlying code.

On Wed, Oct 23, 2013 at 5:05 PM, Mike Jiang notifications@github.comwrote:

As @kevinushey https://github.com/kevinushey suggested for openCytopackage, fread is more robust in terms of detecting column separator, which will be useful for QUALIFIER to load meta data and qa task list from csv.

— Reply to this email directly or view it on GitHubhttps://github.com/RGLab/QUALIFIER/issues/41 .

Greg Finak, PhD Staff Scientist Vaccine and Infectious Disease Division Fred Hutchinson Cancer Research Center Seattle, WA 98109

(206)667-3116 gfinak@fhcrc.org

mikejiang commented 10 years ago

Right, that's why I am gonna only use it for the data loading and will convert data.table to data.frame right after fread :)