Hi, I am a bit confused about the following error:
> x <- read.FCS(fcs, transformation = F, truncate_max_range = F)
> ws <- open_flowjo_xml(wsp) # from CytoML package
> fj_ws_get_samples(ws, group_id = 1) # gets samples
sampleID name count pop.counts
1 1 IntelliCyt_iQue3.fcs 120948 8
> flowjo_to_gatingset(ws, name=1, path='/Users/zagidull/Desktop/Bulat_A02_komal_FlowJo_vs_Intellicyte/13_02_2020/',
+ subset = "export_IntelliCyt_iQue3.fcs")
Error in (function (ws, group_id, subset, execute, path, h5_dir, includeGates, :
No samples in this workspace to parse!
It seems to me that there is a sample in the workspace, as per the fj_ws_get_samples output, yet flowjo_to_gatingset does not seem to see it. Any help is appreciated!
Hi, I am a bit confused about the following error:
It seems to me that there is a sample in the workspace, as per the
fj_ws_get_samples
output, yetflowjo_to_gatingset
does not seem to see it. Any help is appreciated!