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RGLab / flowWorkspace

flowWorkspace
GNU Affero General Public License v3.0
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access to table editor in the wsp flowjo #368

Open qbarbier opened 2 years ago

qbarbier commented 2 years ago

Hello,

Sorry for my naive question, but do you know if it is possible to have access to the user-created table editor in flowJo?

I have access to count of all populations with this command

gs_pop_get_stats(gs)

But the "pop" column contain the path with populations write in the gating strategy on flowJo. My users use anothers names to export this data, with Table Editor Export layout in flowJo (https://docs.flowjo.com/flowjo/tabular-reports/te-export/) in count csv table.

Do you know if i can have access to this table or to the name write by user in the wsp R object or gs object ?

Thank a lot for this package.

Quentin B.

mikejiang commented 2 years ago

This count table is exported as a separate CSV file which is not part of wsp workspace file. Therefore gating set does not know anything about the population names used in this table. Can you show me one example of such table? So that I can see how feasible it is to map these population names between two conventions