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RGLab / openCyto

A package that provides data analysis pipeline for flow cytometry.
GNU Affero General Public License v3.0
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no manual.xml in extdata #178

Closed abbatidanilo closed 6 years ago

abbatidanilo commented 6 years ago

Hello RGLab,

I am trying to dig into the openCyto package and I am having trouble loading the "manual.xml" as depicted in the vignette trough the following commands:

flowDataPath <- system.file("extdata", package = "flowWorkspaceData") wsfile <- list.files(flowDataPath, pattern="manual.xml",full = TRUE) wsfile

I installed the flowWorkspace package but in the extdata directory I have only the _empty_workspace9.2.xml and not the manual.xml file as expected

I also tried to check under the flowWorkspace repository but with no success (the installgithub("flowWorkspace/RGLab", ref="trunk"_) command doesn't work)

could you help me?

thanks

cheers

Danilo Abbati

gfinak commented 6 years ago

The package you need to install is called "flowWorkspaceData".

abbatidanilo commented 6 years ago

many thanks Greg

On Mon, 16 Jul 2018 at 20:07, Greg Finak notifications@github.com wrote:

The package you need to install is called "flowWorkspaceData".

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